Papers

61,005 results
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Article Tier 2

More deterministic assembly constrains the diversity of gut microbiota in freshwater snails

Researchers compared the gut microbiota assembly processes of invasive and native freshwater snails coexisting at multiple sites in southern China. They found that invasive snails exhibited more deterministic gut microbiome assembly with lower microbial diversity, which may contribute to their competitive advantage. The study provides insights into how gut microbial community dynamics may influence the success of invasive species in freshwater ecosystems.

2024 Frontiers in Microbiology 10 citations
Meta Analysis Tier 1

Exploring the Potential of Metatranscriptomics to Describe Microbial Communities and Their Effects in Molluscs

Metatranscriptomics revealed a more complete picture of mussel microbiomes — including bacteria, viruses, fungi, and protozoans — than traditional 16S sequencing alone. The approach also identified host genes whose expression changed with pathogen load, providing new insights into how molluscs respond to microbial infections.

2022 International Journal of Molecular Sciences 11 citations
Article Tier 2

Size-dependent effects of microplastics on intestinal microbiome for Perna viridis

Researchers found that the size of microplastic particles determines how they change the gut bacteria of green mussels, with the smallest particles causing the most disruption to beneficial bacteria and promoting potentially harmful species. Since mussels are widely consumed as seafood, changes to their gut health and the bacteria they carry could affect human food safety.

2024 Journal of Hazardous Materials 23 citations
Article Tier 2

Impacts of microplastics exposure on mussel (Mytilus edulis) gut microbiota

Researchers exposed marine mussels (Mytilus edulis) to microplastics and analyzed changes to their gut microbiota, finding significant shifts in microbial community composition that could affect digestion, immunity, and overall health.

2020 The Science of The Total Environment 111 citations
Article Tier 2

The Structure and Function of Gut Microbiomes of Two Species of Sea Urchins, Mesocentrotus nudus and Strongylocentrotus intermedius, in Japan

This study characterized the gut microbiomes of two sea urchin species important to Japanese marine aquaculture using metagenomic methods, revealing distinct microbial communities linked to habitat and growth conditions. Understanding the microbiome of aquaculture organisms is relevant to their health and food safety, particularly given that environmental contaminants including microplastics can alter gut microbiota.

2021 Frontiers in Marine Science 13 citations
Article Tier 2

Genomics and transcriptomics of the green mussel explain the durability of its byssus

Researchers used whole-genome and foot-specific transcriptomic analysis of the green mussel Perna viridis to identify genes responsible for byssus formation, finding that proteinase inhibitors and cross-linking proteins contribute to the exceptional durability and enzymatic resistance of mussel attachment threads.

2021 Scientific Reports 27 citations
Article Tier 2

Shallow-water mussels (Mytilus galloprovincialis) adapt to deep-sea environment through transcriptomic and metagenomic insights

Researchers placed common shallow-water mussels in deep-sea conditions and found that within just 10 days, the mussels' gene activity and gut microbiome shifted to closely resemble those of native deep-sea mussels — revealing a surprisingly rapid adaptive capacity driven by changes in both host biology and microbial communities.

2025 Communications Biology 3 citations
Article Tier 2

Effects of Ocean Acidification, Hypoxia, and Warming on the Gut Microbiota of the Thick Shell Mussel Mytilus coruscus Through 16S rRNA Gene Sequencing

Researchers found that combined ocean acidification, hypoxia, and warming significantly altered the gut microbiota of the thick shell mussel Mytilus coruscus, disrupting microbial community structure and potentially compromising host health under future climate scenarios.

2021 Frontiers in Marine Science 35 citations
Article Tier 2

Evaluation of Microplastics and Microcystin-LR Effect for Asian Clams (Corbicula fluminea) by a Metabolomics Approach

Researchers used a metabolomics approach to investigate the combined effects of microplastics and microcystin-LR on Asian clams, finding that co-exposure caused distinct metabolic responses compared to individual exposures. The study reveals mechanistic interactions between two co-occurring freshwater pollutants at the cellular metabolic level.

2023 Marine Biotechnology 5 citations
Article Tier 2

The native mussel Mytilus chilensis genome reveals adaptative molecular signatures facing the marine environment

Researchers sequenced and analyzed the genome of the native Chilean blue mussel Mytilus chilensis, identifying adaptive molecular signatures that reflect the species' responses to diverse marine environmental conditions, with implications for understanding resilience in an aquaculture species reliant on wild seed collection.

2022 2 citations
Article Tier 2

Biochemical basis of resistance to multiple contaminations in the native and invasive populations of Dreissena polymorpha

This study compared native and invasive populations of the zebra mussel Dreissena polymorpha in their biochemical tolerance to multiple simultaneous stressors including microplastics, examining how antioxidant and detoxification mechanisms differ between populations.

2023 Comparative Biochemistry and Physiology Part C Toxicology & Pharmacology 4 citations
Article Tier 2

Physiological and transcriptome analysis of Mytilus coruscus in response to Prorocentrum lima and microplastics

The combined effects of diarrhetic shellfish toxin and microplastics on the mussel Mytilus coruscus were assessed at physiological and transcriptomic levels, revealing synergistic disruption of immune function, antioxidant responses, and metabolic pathways. The study provides molecular-level evidence of interactive toxicity between two common coastal contaminants.

2022 Frontiers in Marine Science 18 citations
Article Tier 2

Microplastic exposure reshapes the virome and virus–bacteria networks with implications for immune regulation in Mytilus coruscus

Researchers exposed mussels to microplastics for seven days and analyzed how the pollution affected viral communities in their tissues. They found that microplastic exposure suppressed DNA virus diversity while activating RNA viral metabolism, and restructured interactions between bacteria-infecting viruses and opportunistic pathogens. The study suggests that microplastics may influence immune function in shellfish by reshaping the viral community and virus-mediated immune interactions.

2025 Marine Pollution Bulletin 1 citations
Article Tier 2

Comparison of exoskeleton microbial communities of co-occurring native and invasive crayfish species

Researchers compared the exoskeleton-associated bacterial communities of co-occurring native and invasive crayfish species in a Croatian river, finding highly diverse microbiomes shaped primarily by the local environment but with species-specific differences in composition, and detecting low levels of crayfish pathogens on both species.

2023 Journal of Invertebrate Pathology 5 citations
Article Tier 2

De novo transcriptome assembly of the Perna viridis: A novel invertebrate model for ecotoxicological studies

Researchers created the first detailed gene reference map for the gill tissue of the Asian green mussel, an important species for monitoring ocean pollution. They identified over 47,000 gene sequences, including many related to immune defense and stress responses. This genetic resource will help scientists better understand how marine organisms respond to environmental contaminants like microplastics and heavy metals at the molecular level.

2025 Scientific Data 2 citations
Article Tier 2

Responses of Gut Microbial Community Composition and Function of the Freshwater Gastropod Bellamya aeruginosa to Cyanobacterial Bloom

Researchers tracked gut microbial community composition and function in the freshwater gastropod Bellamya aeruginosa during a cyanobacterial bloom, finding significant shifts in microbiota structure and metabolic function in response to bloom-associated environmental stress. The study provides insight into how harmful algal events alter host-microbiome dynamics in aquatic invertebrates.

2022 Frontiers in Microbiology 18 citations
Article Tier 2

Seasonal variations in microbial diversity and metabolite profiles of the gut of sea cucumber (Apostichopus japonicus)

Researchers used 16S rRNA sequencing and metabolite profiling to examine how seasonal changes affect the gut microbiome composition and intestinal metabolites of sea cucumber (Apostichopus japonicus) in China. They found that symbiotic microbial communities and their metabolic outputs shifted significantly across seasons, reflecting the influence of changing external environments on this economically important aquaculture species.

2022 Frontiers in Marine Science 11 citations
Article Tier 2

Effects of Ocean Acidification and Microplastics on Microflora Community Composition in the Digestive Tract of the Thick Shell Mussel Mytilus coruscus Through 16S RNA Gene Sequencing

This study used 16S rRNA gene sequencing to examine how ocean acidification and microplastic exposure, alone and combined, altered the gut microbiome of the thick shell mussel Mytilus coruscus. Both stressors shifted the composition of beneficial gut bacteria, suggesting that these two marine environmental threats can together compromise mussel digestive health.

2020 Bulletin of Environmental Contamination and Toxicology 33 citations
Article Tier 2

Unleashing multi-omic approaches to address environmental microplastic hazards in marine polychaetes

Researchers used a multi-omic approach (metagenomics and metabolomics) to study how an environmental microplastic mixture affects the gut microbiome and metabolism of marine polychaetes, identifying disruption of specific bacterial taxa and altered metabolite profiles (indoles, flavonoids, terpenes) that indicate physiological stress.

2025 Marine Pollution Bulletin
Article Tier 2

Potential Strategies Applied by Metschnikowia bicuspidata to Survive the Immunity of Its Crustacean Hosts

Transcriptomic comparison of Metschnikowia bicuspidata—the pathogen behind milky disease in Chinese mitten crabs—revealed gene expression changes when in contact with host hemocytes, shedding light on the pathogen's immune evasion strategies that cause significant aquaculture losses.

2025 Pathogens
Article Tier 2

Profiling of microRNAs and mRNAs in marine mussel Mytilus galloprovincialis

Researchers used deep sequencing to profile microRNAs in the Mediterranean blue mussel Mytilus galloprovincialis, identifying 137 miRNA sequences — 104 conserved across species and 33 potentially novel — providing a genomic baseline for studying how this ecologically important species responds to environmental stressors.

2019 Comparative Biochemistry and Physiology Part C Toxicology & Pharmacology 15 citations
Article Tier 2

The gut microbial of sea urchin ( Strongylocentrotus intermedius ) under different temperatures: Microbial structure and co-occurrence patterns

Researchers exposed sea urchins to five temperatures ranging from 13 to 25°C and used high-throughput sequencing to show that elevated temperatures increase gut bacterial diversity, shift dominant genera, alter key metabolic pathways, and strengthen deterministic assembly processes, providing mechanistic insight into how warming reshapes invertebrate gut microbiomes.

2026 Israeli Journal of Aquaculture - Bamidgeh
Article Tier 2

Ocean Warming May Enhance Biochemical Alterations Induced by an Invasive Seaweed Exudate in the Mussel Mytilus galloprovincialis

Researchers found that elevated ocean temperatures amplified the biochemical disruptions caused by exudates from the invasive red seaweed Asparagopsis armata in the mussel Mytilus galloprovincialis. The findings suggest that ocean warming may worsen the impacts of biological invasions on native marine filter feeders.

2021 Toxics 9 citations
Article Tier 2

Evaluation of Microplastics and Microcystin-LR effect for Asian clams (Corbicula flumine) by a metabolomics approach

Using metabolomics, this study found that combined exposure to microplastics and the cyanotoxin microcystin-LR disrupted multiple metabolic pathways in Asian clams, with effects differing from either stressor alone. This matters because freshwater environments often contain both pollutants simultaneously, and the combined metabolic disruption could impair the health of shellfish consumed by humans.

2023 Research Square (Research Square) 2 citations