Marine Copepods as a Microbiome Hotspot: Revealing Their Interactions and Biotechnological Applications

Copepods are the most abundant organisms in marine zooplankton and the primary components of the food chain. They are hotspots for highly adaptable microorganisms, which are pivotal in biogeochemical cycles. The microbiome, encompassing microorganisms within and surrounding marine planktonic organisms, holds considerable potential for biotechnological advancements. Despite marine microbiome research interests expanding, our understanding of the ecological interactions between microbiome and copepods remains limited. This review intends to give an overview of the recent studies regarding the microbiome associated with marine copepods, with particular focus on the diversity of bacteria and fungi. The significance of copepod-associated microbiomes in different contexts, such as aquaculture and biodegradation processes, was evaluated. The ability of the microbiome to mitigate harmful bacterial growth in cultured organisms was also explored. The microbiome associated with copepods has demonstrated efficacy in reducing the proliferation of detrimental bacteria in aquaculture, paving the way for the commercial utilization of natural zooplankton in fish rearing. Additionally, copepod-associated microbiomes may play a role in addressing marine environmental challenges, such as the bioremediation of polluted marine matrices. Overall, this review represents a basis for investigating intricate copepod-associated microbiomes and their diverse applications, enhancing our comprehension of the ecological and evolutionary significance of marine microbiomes.