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Microplastics and nanoplastics detection using flow cytometry: Challenges and methodological advances with fluorescent dye application

MethodsX 2025 11 citations

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This review examined the use of flow cytometry for detecting and counting micro- and nanoplastics in water, including challenges with fluorescent dye application. Researchers found that the technique can detect particles as small as 200 nanometers but that undissolved dye in water samples remains a significant source of measurement error. The review highlights recent methodological improvements and identifies remaining challenges that need to be addressed for reliable nanoplastic quantification.

Flow cytometry (FC) enables the precise quantification of specific types of microparticles and larger nanoparticles (>200 nm) in liquid media. Initially developed for biological applications, this technique has recently been adapted to the environmental field for the measurement of microplastics and nanoplastics (MNPs). Nile Red, a fluorochrome extensively used in MNP analysis due to its effectiveness and accessibility, has been applied to significantly enhance the sensitivity and specificity of MNP detection of this technique. Additionally, flow cytometry offers the advantage of automated detection, allowing the quantification of smaller particles, including those under 1 µm, which are often missed by traditional spectroscopic methods. However, despite its promise, the presence of undissolved dye in aqueous media presents a significant challenge for accurate quantification. In recent years, various methodologies have been developed to overcome these limitations, including the use of co-solvents, surfactants, and pre-filtration or pre-sonication techniques to enhance quantification accuracy. This review examines recent literature on MNPs detection via FC, with a focus on technical improvements made and the remaining metrological challenges, offering insights into how this method can be further refined for future investigations.

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